Student Publications

Name of Trainee	Years supported by CBI, Degree	Mentor(s)

Appella, Daniel	1994-1996, PhD	Gellman
1: Appella DH, Christianson LA, Karle IL, Powell DR, Gellman SH. beta-peptide foldamers: Robust Helix formation in a new family of beta-amino acid oligomers. J Am Chem Soc. 1996 Dec 25;118(51):13071-13072.
2: Appella DH, Christianson LA, Klein DA, Powell DR, Huang XL, Barchi JJ, Gellman SH. Residue-based control of helix shape in beta-peptide oligomers. Nature. 1997 May 22;387(6631):381-384.
3: Applequist J, Bode KA, Appella DH, Christianson LA, Gellman SH. Theoretical and experimental circular dichroic spectra of the novel helical foldamer poly[(1R,2R)-trans-2-aminocyclopentanecarboxylic acid]. J Am Chem Soc. 1998 May 20;120(19):4891-4892.
4: Appella DH, Barchi JJ, Durell SR, Gellman SH. Formation of short, stable helices in aqueous solution by beta-amino acid hexamers. J Am Chem Soc. 1999 Mar 17;121(10):2903-2310.
5: Appella DH , Christianson LA, Karle IL, Powell DR, Gellman SH. Synthesis and characterization of trans-2-aminocyclohexanecarboxylic acid oligomers: An unnatural helical secondary structure and implications for beta-peptide tertiary structure. J Am Chem Soc. 1999 Jul 7;121(26):6206-6212.
6: Appella DH, Christianson LA, Klein DA, Richards MR, Powell DR, Gellman SH. Synthesis and structural characterization of helix-forming beta-peptides: trans-2-aminocyclopentanecarboxylic acid oligomers. J Am Chem Soc. 1999 Aug 25;121(33):7574-7581.
7: Barchi JJ, Huang XL, Appella DH, Christianson LA, Gellman SH. Solution conformations of helix-forming beta-amino acid homooligomers. J Am Chem Soc. 2000 Mar 29;122(12):2711-2718.
8: Christianson LA, Lucero MJ, Appella DH, Klein, DA, Gellman SH. Improved treatment of cyclic beta-amino acids and successful prediction of beta-Peptide secondary structure using a modified force field: AMBER*C. Journal of Comput Chem. 2000 Jul 15;21(9):763-773.
9: Appella DH, LePlae PR, Raguse TL, Gellman SH. (R,R,R)-2,5-diaminocylohexanecarboxylic acid, a building block for water-soluble, helix-forming beta-peptides. J Org Chem. 2000 Jul 28;65(15):4766-4769.
Beauchene Ellis, Nicole	2009-2012, PhD	Coon, Kiley
1: Ledvina AR, Beauchene NA, McAlister GC, Syka JE, Schwartz JC, Griep-Raming J, Westphall MS, Coon JJ. Activated-ion electron transfer dissociation improves the ability of electron transfer dissociation to identify peptides in a complex mixture. Anal Chem. 2010 Dec 15;82(24):10068-74. Epub 2010 Nov 9. PMCID: PMC3005528
2: Grimsrud PA, Swaney DL, Wenger CD, Beauchene NA, Coon JJ. Phosphoproteomics for the masses. ACS Chem Biol. 2010 Jan 15;5(1):105-19. Review. PMCID: PMC2810156
3: Myers KS, Park DM, Beauchene NA, Kiley PJ Defining bacterial regulons using ChIP-seq. Methods. 2015 Sep15;86:80-8. PMCID: PMC4577457
4: Beauchene NA, Myers KS, Chung D, Park DM, Weisnicht AM, Keleş S, Kiley PJ. Impact of Anaerobiosis on Expression of the Iron-Responsive Fur and RyhB Regulons. MBio. 2015 Dec 15;6(6):e01947-15 PMCID: PMC4676285
Binder, Joseph	2005-2009, PhD	Raines
1: Binder JB, Guzei IA, Raines RT. Salicylaldimine ruthenium alkylidene complexes: Metathesis catalysts tuned for protic solvents. Adv Synth Catal. 2007 Feb;349(3):395-404. PMCID: PMC2909136
2: Binder JB, Blank JJ, Raines RT. Olefin metathesis in homogenous aqueous media catalyzed by conventional ruthenium catalysts. Org Lett. 2007 Nov 8;9(23):4885-4888. PMCID: PMC2532671
3: Binder JB, Raines RT. Olefin metathesis for chemical biology. Curr Opin in Chem Biol. 2008 Dec;12(6):767-773. PMCID: PMC2628388
4: Binder JB, Raines RT. Simple chemical tranformation of lignocellulosic biomass into furans for fuels and chemicals. J Am Chem Soc. 2009 Feb 11;131(5):1979-1985.
5: Binder JB, Raines RT. Fermentable sugars by chemical hydrolysis of biomass, Proc Natl Acad of Sci U S A. 2010 Mar 9;107(10):4516-4521. PMCID: PMC2842027
6: Binder JB, Cefali AV, Blank JJ, Raines RT. Mechanistic insights on the conversion of sugars into 5-hydroxymethylfurfural. Energy Environ Sci. 2010 Jun;3(6):765-771.
7: Binder JB, Blank JJ, Cefali AV, Raines RT. Synthesis of furfural from xylose and xylan. ChemSusChem. 2010;3(11):1268-1272.
8: Caes BR, Binder JB, Blank JJ, Raines RT. Separable fluorous ionic liquids for the dissolution and saccharification of cellulose. Green Chem. 2011;13(10):2719-2722.
9: Sen SM, Binder JB, Raines RT, Maravelias CT. Conversion of biomass to sugars via ionic liquid hydrolysis: process synthesis and economic evaluation. Biofuels Bioproducts & Biorefining-BIOFPR. 2012 Jul-Aug;6(4):444-452.
Blum, Travis	2012-2014, PhD	Yoon
1: Blum TR, Zhu Y, Nordeen SA, Yoon TP. Photocatalytic synthesis of dihydrobenzofurans by oxidative [3+2] cycloaddition of phenols. Angew Chem Int Ed Engl. 2014 Oct 6;53(41):11056-9. PMCID: PMC4220618
2: Skubi KL, Blum TR, Yoon TP. Dual Catalysis Strategies in Photochemical Synthesis. Chem Rev. 2016 Apr 25.
Breitbach, Anthony	2009-2012, PhD	Blackwell
1: Frei R, Breitbach AS, Blackwell HE. 2-Aminobenzimidazole derivatives strongly inhibit and disperse Pseudomonas aeruginosa biofilms. Angew Chem Int Ed Engl. 2012 May 21;51(21):5226-9. PMCID: PMC3517033
2: Praneenararat T, Beary TM, Breitbach AS, Blackwell HE. Synthesis and application of an N-acylated l-homoserine lactone derivatized affinity matrix for the isolation of quorum sensing signal receptors. Bioorg Med Chem Lett. 2011 Sep 1;21(17):5054-7. PMCID: PMC3513337
3: Breitbach AS, Broderick AH, Jewell CM, Gunasekaran S, Lin Q, Lynn DM, Blackwell HE. Surface-mediated release of a synthetic small-molecule modulator of bacterial quorum sensing: gradual release enhances activity. Chem Commun (Camb). 2011 Jan 7;47(1):370-2. PMCID: PMC3565574
4: Buck ME, Breitbach AS, Belgrade SK, Blackwell HE, Lynn DM. Chemical modification of reactive multilayered films fabricated from poly(2-alkenyl azlactone)s: design of surfaces that prevent or promote mammalian cell adhesion and bacterial biofilm growth. Biomacromolecules. 2009 Jun 8;10(6):1564-74. PMCID: PMC2697386
5. Broderick AH, Breitbach AS, Frei R, Blackwell HE, Lynn DM. Surface-Mediated Release of a Small-Molecule Modulator of Bacterial Biofilm Formation: A Non-Bactericidal Approach to Inhibiting Biofilm Formation in Pseudomonas aeruginosa. Adv Healthc Mater. 2013 Jul;2(7):993-1000. PMID: 23335593. NIHMSID: NIHMS499282
6. Frei R, Breitbach AS, Blackwell HE. Expedient construction of small molecule macroarrays via sequential palladium- and copper-mediated reactions and their ex situ biological testing. Chem Sci. 2012 May;3(5):1555-1561. PMCID: PMC3507458
Buck, Maren	2006-2008, PhD	Lynn
1: Melamed Yerushalmi S, Buck ME, Lynn DM, Lemcoff NG, Meijler MM. Multivalent alteration of quorum sensing in Staphylococcus aureus. Chem Commun (Camb). 2013 Jun 7;49(45):5177-9. PMID: 23628938
2: Broderick AH, Lockett MR, Buck ME, Yuan Y, Smith LM, Lynn DM. In situ Synthesis of Oligonucleotide Arrays on Surfaces Coated with Crosslinked Polymer Multilayers. Chem Mater. 2012 Mar 13;24(5):939-945. PMCID: PMC3352262
3: Broderick AH, Azarin SM, Buck ME, Palecek SP, Lynn DM. Fabrication and selective functionalization of amine-reactive polymer multilayers on topographically patterned microwell cell culture arrays. Biomacromolecules. 2011 Jun 13;12(6):1998-2007. PMCID: PMC3132112
4: Saurer EM, Flessner RM, Buck ME, Lynn DM. Fabrication of Covalently Crosslinked and Amine-Reactive Microcapsules by Reactive Layer-by-Layer Assembly of Azlactone-Containing Polymer Multilayers on Sacrificial Microparticle Templates. J Mater Chem. 2011 Feb 14;21(6):1736-1745. PMCID: PMC3048458
5: Buck ME, Schwartz SC, Lynn DM. Superhydrophobic Thin Films Fabricated by Reactive Layer-by-Layer Assembly of Azlactone-Functionalized Polymers. Chem Mater. 2010 Sep 11;22(23):6319-6327. PMCID: PMC2998398
6: Buck ME, Lynn DM. Free-standing and reactive thin films fabricated by covalent layer-by-layer assembly and subsequent lift-off of azlactone-containing polymer multilayers. Langmuir. 2010 Oct 19;26(20):16134-40. PMCID: PMC2958244
7: Kinsinger MI, Buck ME, Abbott NL, Lynn DM. Immobilization of polymer-decorated liquid crystal droplets on chemically tailored surfaces. Langmuir. 2010 Jun 15;26(12):10234-42. PMCID: PMC2883006
8: Buck ME, Lynn DM. Functionalization of fibers using azlactone-containing polymers: layer-by-layer fabrication of reactive thin films on the surfaces of hair and cellulose-based materials. ACS Appl Mater Interfaces. 2010 May;2(5):1421-9. PMCID: PMC2877158
9: Sun B, Liu X, Buck ME, Lynn DM. Azlactone-functionalized polymers as reactive templates for parallel polymer synthesis: synthesis and screening of a small library of cationic polymers in the context of DNA delivery. Chem Commun (Camb). 2010 Mar 28;46(12):2016-8. PMCID: PMC2837797
10: Buck ME, Lynn DM. Reactive layer-by-layer assembly of suspended thin films and semipermeable membranes at interfaces created between aqueous and organic phases. Adv Mater. 2010 Mar 5;22(9):994-8. PMID: 20217827
11: Fredin NJ, Flessner RM, Jewell CM, Bechler SL, Buck ME, Lynn DM. Characterization of nanoscale transformations in polyelectrolyte multilayers fabricated from plasmid DNA using laser scanning confocal microscopy in combination with atomic force microscopy. Microsc Res Tech. 2010 Sep;73(9):834-44. PMCID: PMC2889202
12: Kinsinger MI, Buck ME, Meli MV, Abbott NL, Lynn DM. Langmuir films of flexible polymers transferred to aqueous/liquid crystal interfaces induce uniform azimuthal alignment of the liquid crystal. J Colloid Interface Sci. 2010 Jan 1;341(1):124-35. PMCID: PMC2785073
13: Buck ME, Breitbach AS, Belgrade SK, Blackwell HE, Lynn DM. Chemical modification of reactive multilayered films fabricated from poly(2-alkenyl azlactone)s: design of surfaces that prevent or promote mammalian cell adhesion and bacterial biofilm growth. Biomacromolecules. 2009 Jun 8;10(6):1564-74. PMCID: PMC2697386
14: Fredin NJ, Broderick AH, Buck ME, Lynn DM. Nanoimprinted thin films of reactive, azlactone-containing polymers: combining methods for the topographic patterning of cell substrates with opportunities for facile post-fabrication chemical functionalization. Biomacromolecules. 2009 Apr 13;10(4):994-1003. PMCID: PMC2677415
15:Buck ME, Zhang J, Lynn DM. Layer-by-layer assembly of reactive ultrathin films mediated by click-type reactions of poly(2-alkenyl azlactone)s. Adv Mater. 2007 Nov 19;19(22):3951-+.
16: Buck ME, Lynn DM. Layer-by-Layer Fabrication of Covalently Crosslinked and Reactive Polymer Multilayers Using Azlactone-Functionalized Copolymers: A Platform for the Design of Functional Biointerfaces. Adv Eng Mater. 2011 Oct;13(10):B343-B352.
17: Buck ME, Lynn DM. Azlactone-functionalized polymers as reactive platforms for the design of advanced materials: Progress in the last ten years. Polymer Chemistry. 2012;3(1):66-80.
18: Kinsinger MI, Buck ME, Campos F, Lynn DM, Abbott NL. Dynamic ordering transitions of liquid crystals driven by interfacial complexes formed between polyanions and amphiphilic polyamines. Langmuir. 2008 Dec 2;24(23):13231-6. PMCID: PMC3245549
Carr, Heather S.	1996-1999, PhD	Burstyn
1: Carr HS, Tran D, Reynolds MF, Burstyn JN, Spiro TG. Activation of soluble guanylyl cyclase by four-coordinate metalloporphyrins: evidence for a role for porphyrin conformation. Biochemistry. 2002 Aug 6;41(31):10149-57. PMID: 12146980
2. Serfass L, Carr HS, Aschenbrenner LM, Burstyn JN. Calcium ion downregulates soluble guanylyl cyclase activity: evidence for a two-metal ion catalytic mechanism. Arch Biochem Biophys. 2001 Mar 1;387(1):47-56. PMID: 11368183
Chan, Yolande	2002-2005, PhD	Thomas
1: Kohler PL, Chan YA, Hackett KT, Turner N, Hamilton HL, Cloud-Hansen KA, Dillard JP. Mating pair formation homologue TraG is a variable membrane protein essential for contact-independent type IV secretion of chromosomal DNA by Neisseria gonorrhoeae. J Bacteriol. 2013 Apr;195(8):1666-79. PMCID: PMC3624559
2: Chan YA, Hackett KT, Dillard JP. The lytic transglycosylases of Neisseria gonorrhoeae. Microb Drug Resist. 2012 Jun;18(3):271-9. PMCID: PMC3412582
3: Stohl EA, Chan YA, Hackett KT, Kohler PL, Dillard JP, Seifert HS. Neisseria gonorrhoeae virulence factor NG1686 is a bifunctional M23B family metallopeptidase that influences resistance to hydrogen peroxide and colony morphology. J Biol Chem. 2012 Mar 30;287(14):11222-33. PMCID: PMC3322868
4: Chan YA, Thomas MG. Recognition of (2S)-aminomalonyl-acyl carrier protein (ACP) and (2R)-hydroxymalonyl-ACP by acyltransferases in zwittermicin A biosynthesis. Biochemistry. 2010 May 4;49(17):3667-77. PMCID: PMC2860681
5: Chan YA, Podevels AM, Kevany BM, Thomas MG. Biosynthesis of polyketide synthase extender units. Nat Prod Rep. 2009 Jan;26(1):90-114. Review. PMCID: PMC2766543
6: Chan YA, Thomas MG. Formation and characterization of acyl carrier protein-linked polyketide synthase extender units. Methods Enzymol. 2009;459:143-63. PMCID: PMC2765370
7: Felnagle EA, Jackson EE, Chan YA, Podevels AM, Berti AD, McMahon MD, Thomas MG. Nonribosomal peptide synthetases involved in the production of medically relevant natural products. Mol Pharm. 2008 Mar-Apr;5(2):191-211. Review. PMCID: PMC3131160
8: Chan YA, Boyne MT 2nd, Podevels AM, Klimowicz AK, Handelsman J, Kelleher NL, Thomas MG. Hydroxymalonyl-acyl carrier protein (ACP) and aminomalonyl-ACP are two additional type I polyketide synthase extender units. Proc Natl Acad Sci U S A. 2006 Sep 26;103(39):14349-54. PMCID: PMC1599966
9: Thomas MG, Chan YA, Ozanick SG. Deciphering tuberactinomycin biosynthesis: isolation, sequencing, and annotation of the viomycin biosynthetic gene cluster. Antimicrob Agents Chemother. 2003 Sep;47(9):2823-30. PMCID: PMC182626
Cherney, Melisa M.	2001-2004, PhD	Burstyn
1: Ostrowski AD, Deakin SJ, Azhar B, Miller TW, Franco N, Cherney MM, Lee AJ, Burstyn JN, Fukuto JM, Megson IL, Ford PC. Nitric oxide photogeneration from trans-Cr(cyclam)(ONO)(2)(+) in a reducing environment. activation of soluble guanylyl cyclase and arterial vasorelaxation. J Med Chem. 2010 Jan 28;53(2):715-22. PMID: 19950902
2: Miller TW, Cherney MM, Lee AJ, Francoleon NE, Farmer PJ, King SB, Hobbs AJ, Miranda KM, Burstyn JN, Fukuto JM. The effects of nitroxyl (HNO) on soluble guanylate cyclase activity: interactions at ferrous heme and cysteine thiols. J Biol Chem. 2009 Aug 14;284(33):21788-96. PMCID: PMC2755905
3: Cherney MM, Pazicni S, Frank N, Marvin KA, Kraus JP, Burstyn JN. Ferrous human cystathionine beta-synthase loses activity during enzyme assay due to a ligand switch process. Biochemistry. 2007 Nov 13;46(45):13199-210. PMID: 17956124
4: Pazicni S, Cherney MM, Lukat-Rodgers GS, Oliveriusová J, Rodgers KR, Kraus JP, Burstyn JN. The heme of cystathionine beta-synthase likely undergoes a thermally induced redox-mediated ligand switch. Biochemistry. 2005 Dec 27;44(51):16785-95. PMID: 16363792
5: Clark RW, Youn H, Parks RB, Cherney MM, Roberts GP, Burstyn JN. Investigation of the role of the N-terminal proline, the distal heme ligand in the CO sensor CooA. Biochemistry. 2004 Nov 9;43(44):14149-60. PMID: 15518565
Ciolli, Christopher J.	1999-2003, PhD	Belshaw
1: Levitsky K, Boersma MD, Ciolli CJ, Belshaw PJ. Exo-mechanism proximity-accelerated alkylations: investigations of linkers, electrophiles and surface mutations in engineered cyclophilin-cyclosporin systems. Chembiochem. 2005 May;6(5):890-9. PMID: 15832403
2: Ciolli CJ, Kalagher S, Belshaw PJ. TRAM linker: a safety-catch linker for the traceless release of acrylamides. Org Lett. 2004 Jun 10;6(12):1891-4. PMID: 15176776
3: Levitsky K, Ciolli CJ, Belshaw PJ. Selective inhibition of engineered receptors via proximity-accelerated alkylation. Org Lett. 2003 Mar 6;5(5):693-6. PMID: 12605492
Elder, Amy M.	1997-1999, PhD	Rich
1: Elder AM, Rich DH. Two syntheses of the 16- and 17-membered DEF ring systems of chloropeptin and complestatin. Org Lett. 1999 Nov 4;1(9):1443-6. PMID: 10825992
English, Emily (Payne)	2005-2006, PhD	Gellman
1: Chi Y, English EP, Pomerantz WC, Horne WS, Joyce LA, Alexander LR, Fleming WS, Hopkins EA, Gellman SH. Practical synthesis of enantiomerically pure beta2-amino acids via proline-catalyzed diastereoselective aminomethylation of aldehydes. J Am Chem Soc. 2007 May 9;129(18):6050-5. PMID: 17439122
2: English EP, Chumanov RS, Gellman SH, Compton T. Rational development of beta-peptide inhibitors of human cytomegalovirus entry. J Biol Chem. 2006 Feb 3;281(5):2661-7. PMID: 16275647
3: Peelen TJ, Chi Y, English EP, Gellman SH. Synthesis of 4,4-disubstituted 2-aminocyclopentanecarboxylic acid derivatives and their incorporation into 12-helical beta-peptides. Org Lett. 2004 Nov 25;6(24):4411-4. PMID: 15548038
4: Akkarawongsa R, Potocky TB, English EP, Gellman SH, Brandt CR. Inhibition of herpes simplex virus type 1 infection by cationic beta-peptides. Antimicrob Agents Chemother. 2008 Jun;52(6):2120-9. PMCID: PMC2415802
Fix, Shannon R.	1999-2001, MS	Stahl
1: Fix SR, Brice JL, Stahl SS. Efficient intramolecular oxidative amination of olefins through direct dioxygen-coupled palladium catalysis. Angew Chem Int Ed Engl. 2002 Jan 4;41(1):164-6. PMID: 12491473
2. Steinhoff BA, Fix SR, Stahl SS. Mechanistic study of alcohol oxidation by the Pd(OAc)(2)/O(2)/DMSO catalyst system and implications for the development of improved aerobic oxidation catalysts. J Am Chem Soc. 2002 Feb 6;124(5):766-7. PMID: 11817948
Fishman, Josh	2012-2014, PhD	Kiessling
1: Fishman JM, Kiessling LL. Angew Chem Int Ed Engl. 2013 May 3;52(19):5061-4. Synthesis of functionalizable and degradable polymers by ring-opening metathesis polymerization. PMID: 2356869. NIHMSID: NIHMS506345.
Gelman, Michael A.	1998-2002, MD/PhD	Gellman
1: Gelman MA, Weisblum B, Lynn DM, Gellman SH. Biocidal activity of polystyrenes that are cationic by virtue of protonation. Org Lett. 2004 Feb 19;6(4):557-60. PMID: 14961622
2: Gelman MA, Richter S, Cao H, Umezawa N, Gellman SH, Rana TM. Selective binding of TAR RNA by a Tat-derived beta-peptide. Org Lett. 2003 Oct 2;5(20):3563-5. PMID: 14507173
3: Umezawa N, Gelman MA, Haigis MC, Raines RT, Gellman SH. Translocation of a beta-peptide across cell membranes. J Am Chem Soc. 2002 Jan 23;124(3):368-9. PMID: 11792194
George, Nicholas P.	2005-2008, PhD	Keck
1: George NP, Ngo KV, Chitteni-Pattu S, Norais CA, Battista JR, Cox MM, Keck JL. Structure and cellular dynamics of Deinococcus radiodurans single-stranded DNA (ssDNA)-binding protein (SSB)-DNA complexes. J Biol Chem. 2012 Jun 22;287(26):22123-32. PMCID: PMC3381170
2: Yadav T, Carrasco B, Myers AR, George NP, Keck JL, Alonso JC. Genetic recombination in Bacillus subtilis: a division of labor between two single-strand DNA-binding proteins. Nucleic Acids Res. 2012 Jul;40(12):5546-59. PMCID: PMC3384303
3: Marceau AH, Bahng S, Massoni SC, George NP, Sandler SJ, Marians KJ, Keck JL. Structure of the SSB-DNA polymerase III interface and its role in DNA replication. EMBO J. 2011 Aug 19;30(20):4236-47. PMCID: PMC3199393
4: Lu D, Myers AR, George NP, Keck JL. Mechanism of Exonuclease I stimulation by the single-stranded DNA-binding protein. Nucleic Acids Res. 2011 Aug;39(15):6536-45. PMCID: PMC3159472
5: Page AN, George NP, Marceau AH, Cox MM, Keck JL. Structure and biochemical activities of Escherichia coli MgsA. J Biol Chem. 2011 Apr 8;286(14):12075-85. PMCID: PMC3069411
6: Petrova V, Satyshur KA, George NP, McCaslin D, Cox MM, Keck JL. X-ray crystal structure of the bacterial conjugation factor PsiB, a negative regulator of RecA. J Biol Chem. 2010 Oct 1;285(40):30615-21. Epub 2010 Jul 21. PMCID: PMC2945556
7: George NP, Keck JL. Molecular biology: Slip sliding on DNA. Nature. 2009 Oct 22;461(7267):1067-8. PMCID: PMC2819181
8: Galm U, Wendt-Pienkowski E, Wang L, George NP, Oh TJ, Yi F, Tao M, Coughlin JM, Shen B. The biosynthetic gene cluster of zorbamycin, a member of the bleomycin family of antitumor antibiotics, from Streptomyces flavoviridis ATCC 21892. Mol Biosyst. 2009 Jan;5(1):77-90. PMCID: PMC3086045
9: Tao M, Wang L, Wendt-Pienkowski E, George NP, Galm U, Zhang G, Coughlin JM, Shen B. The tallysomycin biosynthetic gene cluster from Streptoalloteichus hindustanus E465-94 ATCC 31158 unveiling new insights into the biosynthesis of the bleomycin family of antitumor antibiotics. Mol Biosyst. 2007 Jan;3(1):60-74. PMID: 17216057
10: Wang L, Yun BS, George NP, Wendt-Pienkowski E, Galm U, Oh TJ, Coughlin JM, Zhang G, Tao M, Shen B. Glycopeptide antitumor antibiotic zorbamycin from Streptomyces flavoviridis ATCC 21892: strain improvement and structure elucidation. J Nat Prod. 2007 Mar;70(3):402-6. PMCID: PMC2579990
Gorres, Kelly L.	2003-2006, PhD	Raines
1: Gorres KL, Raines RT. Prolyl 4-hydroxylase. Crit Rev Biochem Mol Biol. 2010 Apr;45(2):106-24. Review. PMCID: PMC2841224
2: Gorres KL, Pua KH, Raines RT. Stringency of the 2-His-1-Asp active-site motif in prolyl 4-hydroxylase. PLoS One. 2009 Nov 5;4(11):e7635. PMCID: PMC2767507
3: Derewenda U, Boczek T, Gorres KL, Yu M, Hung LW, Cooper D, Joachimiak A, Raines RT, Derewenda ZS. Structure and function of Bacillus subtilis YphP, a prokaryotic disulfide isomerase with a CXC catalytic motif. Biochemistry. 2009 Sep 15;48(36):8664-71. PMCID: PMC2739605
4: Gorres KL, Raines RT. Direct and continuous assay for prolyl 4-hydroxylase. Anal Biochem. 2009 Mar 15;386(2):181-5. PMCID: PMC2643311
4: Gorres KL, Edupuganti R, Krow GR, Raines RT. Conformational preferences of substrates for human prolyl 4-hydroxylase. Biochemistry. 2008 Sep 9;47(36):9447-55. PMCID: PMC2810141
Harper, Laura A.	1995-1996, PhD	Vedejs
Vedejs E, Daugulis O, Harper LA, MacKay JA, Powell DR. A comparison of monocyclic and bicyclic phospholanes as acyl-transfer catalysts. J Org Chem. 2003 Jun 27;68(13):5020-7. PMID: 12816454 [PubMed]
Hinderaker, Matthew P.	2000-2001, MS	Raines
1: Arnold U, Hinderaker MP, Köditz J, Golbik R, Ulbrich-Hofmann R, Raines RT. Protein prosthesis: a nonnatural residue accelerates folding and increases stability. J Am Chem Soc. 2003 Jun 25;125(25):7500-1. PMID: 12812474
2: Arnold U, Hinderaker MP, Raines RT. Semisynthesis of ribonuclease A using intein-mediated protein ligation. ScientificWorldJournal. 2002 Jun 28;2:1823-7. PMID: 12806173
3: Hinderaker MP, Raines RT. An electronic effect on protein structure. Protein Sci. 2003 Jun;12(6):1188-94. PMID: 12761389
4: Arnold U, Hinderaker MP, Nilsson BL, Huck BR, Gellman SH, Raines RT. Protein prosthesis: a semisynthetic enzyme with a beta-peptide reverse turn. J Am Chem Soc. 2002 Jul 24;124(29):8522-3. PMID: 12121081
Howard, Alex L.	2013-2014, MS	Beebe
1: Howard AL, Pezzi HM, Beebe DJ, Berry SM. Exclusion-Based Capture and Enumeration of CD4+ T-Cells from Whole Blood for Low-Resource Settings. J Lab Autom. 2013 Oct 18;19(3):313-321. PMID: 24142472
Jenkins, Cara L.	1998-2001, PhD	Raines
1: Jenkins CL, Vasbinder MM, Miller SJ, Raines RT. Peptide bond isosteres: ester or (E)-alkene in the backbone of the collagen triple helix. Org Lett. 2005 Jun 23;7(13):2619-22. PMID: 15957905
2: Jenkins CL, Thiyagarajan N, Sweeney RY, Guy MP, Kelemen BR, Acharya KR, Raines RT. Binding of non-natural 3′-nucleotides to ribonuclease A. FEBS J. 2005 Feb;272(3):744-55. PMID: 15670155
3: Jenkins CL, Lin G, Duo J, Rapolu D, Guzei IA, Raines RT, Krow GR. Substituted 2-azabicyclo[2.1.1]hexanes as constrained proline analogues: implications for collagen stability. J Org Chem. 2004 Dec 10;69(25):8565-73. Erratum in: J Org Chem. 2006 Feb 17;71(4):1754. PMID: 15575731
4: Jenkins CL, McCloskey AI, Guzei IA, Eberhardt ES, Raines RT. O-acylation of hydroxyproline residues: effect on peptide-bond isomerization and collagen stability. Biopolymers. 2005;80(1):1-8. PMCID: PMC2824568
5: Jenkins CL, Bretscher LE, Guzei IA, Raines RT. Effect of 3-hydroxyproline residues on collagen stability. J Am Chem Soc. 2003 May 28;125(21):6422-7. PMID: 12785781
6: Jardine AM, Leonidas DD, Jenkins CL, Park C, Raines RT, Acharya KR, Shapiro R. Cleavage of 3′,5′-pyrophosphate-linked dinucleotides by ribonuclease A and angiogenin. Biochemistry. 2001 Aug 28;40(34):10262-72. PMID: 11513604
7: Bretscher LE, Jenkins CL, Taylor KM, DeRider ML, Raines RT. Conformational stability of collagen relies on a stereoelectronic effect. J Am Chem Soc. 2001 Jan 31;123(4):777-8. No abstract available. PMID: 11456609
8: Mannino SJ, Jenkins CL, Raines RT. Chemical mechanism of DNA cleavage by the homing endonuclease I-PpoI. Biochemistry. 1999 Dec 7;38(49):16178-86. PMID: 10587440
9: Jenkins CL, Raines RT. Insights on the conformational stability of collagen. Nat Prod Rep. 2002 Feb;19(1):49-59. PMID: 11902439
Johnson, Heather D.	2002-2005, PhD	Thorson
1: Johnson HD, Thorson JS. Characterization of CalE10, the N-oxidase involved in calicheamicin hydroxyaminosugar formation. J Am Chem Soc. 2008 Dec 31;130(52):17662-3. PMCID: PMC2704561
2: McCoy JG, Johnson HD, Singh S, Bingman CA, Lei IK, Thorson JS, Phillips GN Jr. Structural characterization of CalO2: a putative orsellinic acid P450 oxidase in the calicheamicin biosynthetic pathway. Proteins. 2009 Jan;74(1):50-60. PMCID: PMC2742692
Johnson, Lisa	2008-2011, PhD	Gellman
1: Johnson LM, Gellman SH. α-Helix mimicry with α/β-peptides. Methods Enzymol. 2013;523:407-29. PMCID: PMC3928965
2: Johnson LM, Mortenson DE, Yun HG, Horne WS, Ketas TJ, Lu M, Moore JP, Gellman SH. Enhancement of α-helix mimicry by an α/β-peptide foldamer via incorporation of a dense ionic side-chain array. J Am Chem Soc. 2012 May 2;134(17):7317-20. PMCID: PMC3377471
3: Johnson LM, Horne WS, Gellman SH. Broad distribution of energetically important contacts across an extended protein interface. J Am Chem Soc. 2011 Jul 6;133(26):10038-41. PMCID: PMC3141812
4: Horne WS, Johnson LM, Ketas TJ, Klasse PJ, Lu M, Moore JP, Gellman SH. Structural and biological mimicry of protein surface recognition by alpha/beta-peptide foldamers. Proc Natl Acad Sci U S A. 2009 Sep 1;106(35):14751-6. PMCID: PMC2736470
Johnson, Olivia	2007-2010, PhD	Brunold
1: Johnson OE, Ryan KC, Maroney MJ, Brunold TC. Spectroscopic and computational investigation of three Cys-to-Ser mutants of nickel superoxide dismutase: insight into the roles played by the Cys2 and Cys6 active-site residues. J Biol Inorg Chem. 2010 Jun;15(5):777-93. PMCID: PMC2997571
2:Ryan KC, Johnson OE, Cabelli DE, Brunold TC, Maroney MJ. Nickel superoxide dismutase: structural and functional roles of Cys2 and Cys6. J Biol Inorg Chem. 2010 Jun;15(5):795-807. PMCID: PMC3010328
Kolonko, Erin (McElroy)	2001-2005, PhD	Kiessling
1: Kolonko EM, Kiessling LL. A polymeric domain that promotes cellular internalization. J Am Chem Soc. 2008 Apr 30;130(17):5626-7. PMCID: PMC3216674
2: Borrok MJ, Kolonko EM, Kiessling LL. Chemical probes of bacterial signal transduction reveal that repellents stabilize and attractants destabilize the chemoreceptor array. ACS Chem Biol. 2008 Feb 15;3(2):101-9. PMID: 18278851
3: Kolonko EM, Pontrello JK, Mangold SL, Kiessling LL. General synthetic route to cell-permeable block copolymers via ROMP. J Am Chem Soc. 2009 Jun 3;131(21):7327-33. PMCID: PMC2750816
Kremer, John J.	1997-1999, PhD	Murphy
1: Kremer JJ, Murphy RM. Kinetics of adsorption of beta-amyloid peptide Abeta(1-40) to lipid bilayers. J Biochem Biophys Methods. 2003 Aug 29;57(2):159-69. PMID: 12915007
2: Kremer JJ, Sklansky DJ, Murphy RM. Profile of changes in lipid bilayer structure caused by beta-amyloid peptide. Biochemistry. 2001 Jul 24;40(29):8563-71. PMID: 11456496
3: Kremer JJ, Pallitto MM, Sklansky DJ, Murphy RM. Correlation of beta-amyloid aggregate size and hydrophobicity with decreased bilayer fluidity of model membranes. Biochemistry. 2000 Aug 22;39(33):10309-18. PMID: 10956020
Kutz-Naber, Kimberly K.	2003-2006, PhD	Li
1: Fu Q, Kutz KK, Schmidt JJ, Hsu YW, Messinger DI, Cain SD, de la Iglesia HO, Christie AE, Li L. Hormone complement of the Cancer productus sinus gland and pericardial organ: an anatomical and mass spectrometric investigation. J Comp Neurol. 2005 Dec 26;493(4):607-26. PMID: 16304631
2: Messinger DI, Kutz KK, Le T, Verley DR, Hsu YW, Ngo CT, Cain SD, Birmingham JT, Li L, Christie AE. Identification and characterization of a tachykinin-containing neuroendocrine organ in the commissural ganglion of the crab Cancer productus. J Exp Biol. 2005 Sep;208(Pt 17):3303-19. PMID: 16109892
3: Yew JY, Kutz KK, Dikler S, Messinger L, Li L, Stretton AO. Mass spectrometric map of neuropeptide expression in Ascaris suum. J Comp Neurol. 2005 Aug 8;488(4):396-413. PMID: 15973679
4: Kutz KK, Schmidt JJ, Li L. In situ tissue analysis of neuropeptides by MALDI FTMS in-cell accumulation. Anal Chem. 2004 Oct 1;76(19):5630-40. PMID: 15456280
5: DeKeyser SS, Kutz-Naber KK, Schmidt JJ, Barrett-Wilt GA, Li L. Imaging mass spectrometry of neuropeptides in decapod crustacean neuronal tissues. J Proteome Res. 2007 May;6(5):1782-91. PMCID: PMC2529365
6: Christie AE, Kutz-Naber KK, Stemmler EA, Klein A, Messinger DI, Goiney CC, Conterato AJ, Bruns EA, Hsu YW, Li L, Dickinson PS. Midgut epithelial endocrine cells are a rich source of the neuropeptides APSGFLGMRamide (Cancer borealis tachykinin-related peptide Ia) and GYRKPPFNGSIFamide (Gly1-SIFamide) in the crabs Cancer borealis, magister, and productus. J Exp Biol. 2007 Feb;210(Pt 4):699-714. PMID: 17267655
7: Ma M, Kutz-Naber KK, Li L. Methyl esterification assisted MALDI FTMS characterization of the orcokinin neuropeptide family. Anal Chem. 2007 Jan 15;79(2):673-81. PMID: 17222036
8: Saideman SR, Ma M, Kutz-Naber KK, Cook A, Torfs P, Schoofs L, Li L, Nusbaum MP. Modulation of rhythmic motor activity by pyrokinin peptides. J Neurophysiol. 2007 Jan;97(1):579-95. PMID: 17065249
9: Cruz-Bermúdez ND, Fu Q, Kutz-Naber KK, Christie AE, Li L, Marder E. Mass spectrometric characterization and physiological actions of GAHKNYLRFamide, a novel FMRFamide-like peptide from crabs of the genus Cancer. J Neurochem. 2006 May;97(3):784-99. PMID: 16515542
10: Ma M, Sturm RM, Kutz-Naber KK, Fu Q, Li L. Immunoaffinity-based mass spectrometric characterization of the FMRFamide-related peptide family in the pericardial organ of Cancer borealis. Biochem Biophys Res Commun. 2009 Dec 11;390(2):325-30. PMCID: PMC2767467
11: Yew JY, Wang Y, Barteneva N, Dikler S, Kutz-Naber KK, Li L, Kravitz EA. Analysis of neuropeptide expression and localization in adult drosophila melanogaster central nervous system by affinity cell-capture mass spectrometry. J Proteome Res. 2009 Mar;8(3):1271-84. PMCID: PMC2693453
Lambert, William T.	1998-2002, PhD	Burke
1: Lambert WT, Hanson GH, Benayoud F, Burke SD. Halichondrin B: synthesis of the C1-C22 subunit. J Org Chem. 2005 Nov 11;70(23):9382-98. PMID: 16268612
2: Guzei IA, Clark RW, Burke SD, Lambert WT. A comparison of the ring conformational properties of two derivatives prepared from the same diene diacetate precursor. Acta Crystallogr C. 2003 Dec;59(Pt 12):o721-3. PMID: 14671382
3: Lambert WT, Burke SD. Halichondrin B: synthesis of a C1-C14 model via desymmetrization of (+)-conduritol E. Org Lett. 2003 Feb 20;5(4):515-8. PMID: 12583757
4: Clark RW, Guzei IA, Ivanov SA, Burke SD, Lambert WT. The lack of C2 molecular symmetry in (1R,2R,3S,6S)-3,6-dibenzyloxycyclohex-4-ene-1,2-diol. Acta Crystallogr C. 2001 Jul;57(Pt 7):844-5. PMID: 11443261
5: Burke SD, Jung KW, Lambert WT, Phillips JR, Klovning JJ. Halichondrin B: synthesis of the C(1)-C(15) subunit. J Org Chem. 2000 Jun 30;65(13):4070-87. PMID: 10866625
Lennen, Rebecca	2008-2011, PhD	Pfleger
1: Youngquist JT, Lennen RM, Ranatunga DR, Bothfeld WH, Marner WD 2nd, Pfleger BF. Kinetic modeling of free fatty acid production in Escherichia coli based on continuous cultivation of a plasmid free strain. Biotechnol Bioeng. 2012 Jun;109(6):1518-27. PMID: 22234725
2: Lennen RM, Kruziki MA, Kumar K, Zinkel RA, Burnum KE, Lipton MS, Hoover SW, Ranatunga DR, Wittkopp TM, Marner WD 2nd, Pfleger BF. Membrane stresses induced by overproduction of free fatty acids in Escherichia coli. Appl Environ Microbiol. 2011 Nov;77(22):8114-28. PMCID: PMC3208990
3: Hoover SW, Marner WD 2nd, Brownson AK, Lennen RM, Wittkopp TM, Yoshitani J, Zulkifly S, Graham LE, Chaston SD, McMahon KD, Pfleger BF. Bacterial production of free fatty acids from freshwater macroalgal cellulose. Appl Microbiol Biotechnol. 2011 Jul;91(2):435-46. PMID: 21643704 NIHMSID: NIHMS524198.
4: Lennen RM, Braden DJ, West RA, Dumesic JA, Pfleger BF. A process for microbial hydrocarbon synthesis: Overproduction of fatty acids in Escherichia coli and catalytic conversion to alkanes. Biotechnol Bioeng. 2010 Jun 1;106(2):193-202. PMID: 20073090 NIHMSID: NIHMS524199.
5: Lennen RM, Politz MG, Kruziki MA, Pfleger BF. Identification of Transport Proteins Involved in Free Fatty Acid Efflux in Escherichia coli. J Bacteriol. 2012 Oct 26. PMCID: PMC3536169
6: Lennen RM, Pfleger BF. Engineering Escherichia coli to synthesize free fatty acids. Trends Biotechnol. 2012 Oct 23. PMID: 23102412. NIHMSID: NIHMS480182.
7: Lennen RM, Pfleger BF. Microbial production of fatty acid-derived fuels and chemicals. Curr Opin Biotechnol. 2013 Mar 28. PMID: 23541503. NIHMSID: NIHMS524196.
8: Lennen RM, Pfleger BF. Modulating membrane composition alters free fatty acid tolerance in Escherichia coli. PLoS One. 2013;8(1):e54031. PMCID: PMC3549993
Lietz, Chris	2012-2013	Li
1: Lietz CB, Yu Q, Li L. Large-Scale Collision Cross-Section Profiling on a Traveling Wave Ion Mobility Mass Spectrometer. J Am Soc Mass Spectrom. 2014 May 21.
2: Sturm RM, Lietz CB, Li L. Improved isobaric tandem mass tag quantification by ion mobility mass spectrometry. Rapid Commun Mass Spectrom. 2014 May 15;28(9):1051-60.
3: Jia C, Lietz CB, Ye H, Hui L, Yu Q, Yoo S, Li L. A multi-scale strategy for discovery of novel endogenous neuropeptides in the crustacean nervous system. J Proteomics. 2013 Oct 8;91:1-12. PMID: 23806756 NIHMSID: NIHMS512166
4: Lietz CB, Gemperline E, Li L. Qualitative and quantitative mass spectrometry imaging of drugs and metabolites. Adv Drug Deliv Rev. 2013 Apr 18. PMCID: PMC3737419
5: Jia C, Hui L, Cao W, Lietz CB, Jiang X, Chen R, Catherman AD, Thomas PM, Ge Y, Kelleher NL, Li L. High-definition de novo sequencing of crustacean hyperglycemic hormone (CHH)-family neuropeptides. Mol Cell Proteomics. 2012 Dec;11(12):1951-64. PMCID: PMC3518134
Lippmann, Ethan	2009-2012, PhD	Shusta
1: Lippmann ES, Azarin SM, Kay JE, Nessler RA, Wilson HK, Al-Ahmad A, Palecek SP, Shusta EV. Derivation of blood-brain barrier endothelial cells from human pluripotent stem cells. Nat Biotechnol. 2012 Aug;30(8):783-91. PMCID: PMC3467331
2: Lippmann ES, Weidenfeller C, Svendsen CN, Shusta EV. Blood-brain barrier modeling with co-cultured neural progenitor cell-derived astrocytes and neurons. J Neurochem. 2011 Nov;119(3):507-20. PMCID: PMC3192906
3: Agarwal N, Lippmann ES, Shusta EV. Identification and expression profiling of blood-brain barrier membrane proteins. J Neurochem. 2010 Feb;112(3):625-35. PMCID: PMC2809131
4: Lippmann ES, Al-Ahmad A, Palecek SP, Shusta EV. Modeling the blood-brain barrier using stem cell sources. Fluids Barriers CNS. 2013 Jan 10;10(1):2. PMCID: PMC3564868
Marvin, Christopher C.	2004-2007, PhD	Burke
1: Marvin CC, Voight EA, Burke SD. Synthesis of (+)-didemniserinolipid B via ketalization/ring-closing metathesis. Org Lett. 2007 Dec 20;9(26):5357-9. PMID: 18047361
2: Marvin CC, Clemens AJ, Burke SD. Synthesis of thromboxane B2 via ketalization/ring-closing metathesis. Org Lett. 2007 Dec 20;9(26):5353-6. PMID: 18047355
3: Marvin CC, Voight EA, Suh JM, Paradise CL, Burke SD. Synthesis of (+)-didemniserinolipid B: application of a 2-allyl-4-fluorophenyl auxiliary for relay ring-closing metathesis. J Org Chem. 2008 Nov 7;73(21):8452-7. PMCID: PMC2657677
Mays, Jared R.	2004-2007, PhD	Rajski
1: Mays JR, Weller Roska RL, Sarfaraz S, Mukhtar H, Rajski SR. Identification, synthesis, and enzymology of non-natural glucosinolate chemopreventive candidates. Chembiochem. 2008 Mar 25;9(5):729-47. PMID: 18327862
2: Mays JR, Restituyo JA, Katzenberger RJ, Wassarman DA, Rajski SR. Cyclic disulfides as functional mimics of the histone deacetylase inhibitor FK-228. Tetrahedron Lett. 2007 Jun 25;48(26):4579-4583. PMCID: PMC2084391
McKay, Sonya L.	1996-1999, PhD	Gellman
1: McKay SL, Haptonstall B, Gellman SH. Beyond the hydrophobic effect: attractions involving heteroaromatic rings in aqueous solution. J Am Chem Soc. 2001 Feb 14;123(6):1244-5. PMID: 11456685
2: Gardner RR, McKay SL, Gellman SH. Solvent-dependent stabilization of the E configuration of propargylic secondary amides. Org Lett. 2000 Jul 27;2(15):2335-8. PMID: 10930277
3: McQuade DT, McKay SL Powell DR, Gellman SH. Indifference to hydrogen bonding in a family of secondary amides. J. Am. Chem. Soc., 1997, 119 (36), pp 8528–8532.
Mera, Paola	2005-2007, PhD	Escalante
1: Park K, Mera PE, Escalante-Semerena JC, Brunold TC. Spectroscopic characterization of active-site variants of the PduO-type ATP:corrinoid adenosyltransferase from Lactobacillus reuteri: insights into the mechanism of four-coordinate Co(II)corrinoid formation. Inorg Chem. 2012 Apr 16;51(8):4482-94. PMID: 22480351 NIHMSID: NIHMS369005.
2: Mera PE, Escalante-Semerena JC. Multiple roles of ATP:cob(I)alamin adenosyltransferases in the conversion of B12 to coenzyme B12. Appl Microbiol Biotechnol. 2010 Sep;88(1):41-8. PMCID: PMC3034633
3: Mera PE, Escalante-Semerena JC. Dihydroflavin-driven adenosylation of 4-coordinate Co(II) corrinoids: are cobalamin reductases enzymes or electron transfer proteins? J Biol Chem. 2010 Jan 29;285(5):2911-7. PMCID: PMC2823439
4: Mera PE, St Maurice M, Rayment I, Escalante-Semerena JC. Residue Phe112 of the human-type corrinoid adenosyltransferase (PduO) enzyme of Lactobacillus reuteri is critical to the formation of the four-coordinate Co(II) corrinoid substrate and to the activity of the enzyme. Biochemistry. 2009 Apr 14;48(14):3138-45. PMCID: PMC2666787
5: Park K, Mera PE, Escalante-Semerena JC, Brunold TC. Kinetic and spectroscopic studies of the ATP:corrinoid adenosyltransferase PduO from Lactobacillus reuteri: substrate specificity and insights into the mechanism of Co(II)corrinoid reduction. Biochemistry. 2008 Aug 26;47(34):9007-15. PMCID: PMC2574751
6: St Maurice M, Mera P, Park K, Brunold TC, Escalante-Semerena JC, Rayment I. Structural characterization of a human-type corrinoid adenosyltransferase confirms that coenzyme B12 is synthesized through a four-coordinate intermediate. Biochemistry. 2008 May 27;47(21):5755-66. PMID: 18452306
7: Mera PE, St Maurice M, Rayment I, Escalante-Semerena JC. Structural and functional analyses of the human-type corrinoid adenosyltransferase (PduO) from Lactobacillus reuteri. Biochemistry. 2007 Dec 4;46(48):13829-36. PMID: 17988155
8: St Maurice M, Mera PE, Taranto MP, Sesma F, Escalante-Semerena JC, Rayment I. Structural characterization of the active site of the PduO-type ATP:Co(I)rrinoid adenosyltransferase from Lactobacillus reuteri. J Biol Chem. 2007 Jan 26;282(4):2596-605. PMID: 17121823
Michaelis, David	2004-2007, PhD	Yoon
1: Michaelis DJ, Williamson KS, Yoon TP. Oxaziridine-mediated enantioselective aminohydroxylation of styrenes catalyzed by copper(II) bis(oxazoline) complexes. Tetrahedron. 2009 Jun 27;65(26):5118-5124. PMCID: PMC2729913
2: Michaelis DJ, Ischay MA, Yoon TP. Activation of N-sulfonyl oxaziridines using copper(II) catalysts: aminohydroxylations of styrenes and 1,3-dienes. J Am Chem Soc. 2008 May 21;130(20):6610-5. PMID: 18426204
3: Michaelis DJ, Shaffer CJ, Yoon TP. Copper(II)-catalyzed aminohydroxylation of olefins. J Am Chem Soc. 2007 Feb 21;129(7):1866-7. PMID: 17260993
Miller, Reagan	2001-2004 PhD	Lee
1: Li J, Park S, Miller RL, Lee D. Tandem enyne metathesis-metallotropic [1,3]-shift for a concise total syntheses of (+)-asperpentyn, (-)-harveynone, and (-)-tricholomenyn A. Org Lett. 2009 Feb 5;11(3):571-4. PMCID: PMC2647808
2: Kim M, Miller RL, Lee D. Cross and ring-closing metathesis of 1,3-diynes: metallotropic [1,3]-shift of ruthenium carbenes. J Am Chem Soc. 2005 Sep 21;127(37):12818-9. PMID: 16159273
3: Maifeld SV, Miller RL, Lee D. Group-selective ring-closing enyne metathesis: concentration-dependent selectivity profile of alkynylsilyloxy-tethered dienynes. J Am Chem Soc. 2004 Oct 6;126(39):12228-9. PMID: 15453731
4: Miller RL, Maifeld SV, Lee D. Ruthenium-catalyzed silyl ether formation and enyne metathesis sequence: synthesis of siloxacycles from terminal alkenyl alcohols and alkynylsilanes. Org Lett. 2004 Aug 5;6(16):2773-6. PMID: 15281766
5: Maifeld SV, Miller RL, Lee D. Activation of silanes by Grubbs’ carbene complex Cl-2(PCy3)(2)Ru=CHPh: dehydrogenative condensation of alcohols and hydrosilylation of carbonyls. Tetrahedron Lett. 2002;43(36):6363-6366.
Moore, Ted	2010-2013	Escalante
1: Moore TC, Newmister SA, Rayment I, Escalante-Semerena JC. Structural insights into the mechanism of four-coordinate Cob(II)alamin formation in the active site of the Salmonella enterica ATP:Co(I)rrinoid adenosyltransferase enzyme: critical role of residues Phe91 and Trp93. Biochemistry. 2012 Dec 4;51(48):9647-57. PMCID: PMC3567240.
Musah, Samira	2011-2013, PhD	Kiessling
1: Musah S, Morin SA, Wrighton PJ, Zwick DB, Jin S, Kiessling LL. Glycosaminoglycan-Binding Hydrogels Enable Mechanical Control of Human Pluripotent Stem Cell Self-Renewal. ACS Nano. 2012 Oct 1. PMCID: PMC3509190
2: Derda R, Musah S, Orner BP, Klim JR, Li L, Kiessling LL. High-throughput discovery of synthetic surfaces that support proliferation of pluripotent cells. J Am Chem Soc. 2010 Feb 3;132(4):1289-95. PMCID: PMC2819098
Nemec, Corey	2011-	Ansari
1: Zhang DW, Rodríguez-Molina JB, Tietjen JR, Nemec CM, Ansari AZ. Emerging Views on the CTD Code. Genet Res Int. 2012;2012:347214. PMCID: PMC3335543
Odegard, Amy L.	1999-2000, PhD	Nibert
1: Nibert ML, Odegard AL, Agosto MA, Chandran K, Schiff LA. Putative autocleavage of reovirus mu1 protein in concert with outer-capsid disassembly and activation for membrane permeabilization. J Mol Biol. 2005 Jan 21;345(3):461-74. PMID: 15581891
2: Odegard AL, Chandran K, Zhang X, Parker JS, Baker TS, Nibert ML. Putative autocleavage of outer capsid protein micro1, allowing release of myristoylated peptide micro1N during particle uncoating, is critical for cell entry by reovirus. J Virol. 2004 Aug;78(16):8732-45. PMCID: PMC479062
3: Odegard AL, Chandran K, Liemann S, Harrison SC, Nibert ML. Disulfide bonding among micro 1 trimers in mammalian reovirus outer capsid: a late and reversible step in virion morphogenesis. J Virol. 2003 May;77(9):5389-400. PMCID: PMC153963
Oliver, Sam	2007-2010, PhD	Denu
1: Oliver SS, Musselman CA, Srinivasan R, Svaren JP, Kutateladze TG, Denu JM. Multivalent Recognition of Histone Tails by the PHD Fingers of CHD5. Biochemistry. 2012 Aug 21;51(33):6534-44. PMID: 22834704
2: Oliver SS, Denu JM. Disrupting the reader of histone language. Angew Chem Int Ed Engl. 2011 Jun 20;50(26):5801-3. PMCID: PMC3327163
3: Oliver SS, Denu JM. Dynamic interplay between histone H3 modifications and protein interpreters: emerging evidence for a “histone language”. Chembiochem. 2011 Jan 24;12(2):299-307. PMCID: PMC3073147
4: Garske AL, Oliver SS, Wagner EK, Musselman CA, LeRoy G, Garcia BA, Kutateladze TG, Denu JM. Combinatorial profiling of chromatin binding modules reveals multisite discrimination. Nat Chem Biol. 2010 Apr;6(4):283-90. PMCID: PMC2922993
5: Musselman CA, Ramírez J, Sims JK, Mansfield RE, Oliver SS, Denu JM, Mackay JP, Wade PA, Hagman J, Kutateladze TG. Bivalent recognition of nucleosomes by the tandem PHD fingers of the CHD4 ATPase is required for CHD4-mediated repression. Proc Natl Acad Sci U S A. 2012 Jan 17;109(3):787-92. PMCID: PMC3271909
6: Mansfield RE, Musselman CA, Kwan AH, Oliver SS, Garske AL, Davrazou F, Denu JM, Kutateladze TG, Mackay JP. Plant homeodomain (PHD) fingers of CHD4 are histone H3-binding modules with preference for unmodified H3K4 and methylated H3K9. J Biol Chem. 2011 Apr 1;286(13):11779-91. PMCID: PMC3064229
7: Musselman CA, Mansfield RE, Garske AL, Davrazou F, Kwan AH, Oliver SS, O’Leary H, Denu JM, Mackay JP, Kutateladze TG. Binding of the CHD4 PHD2 finger to histone H3 is modulated by covalent modifications. Biochem J. 2009 Sep 25;423(2):179-87. PMCID: PMC2885444
Peterson-Kaufman, Kimberly	2004-2007, PhD	Gellmann
1: Haase HS, Peterson-Kaufman KJ, Lan Levengood SK, Checco JW, Murphy WL, Gellman SH. Extending foldamer design beyond α-helix mimicry: α/β-peptide inhibitors of vascular endothelial growth factor signaling. J Am Chem Soc. 2012 May 9;134(18):7652-5. PMCID: PMC3551614
2: Boersma MD, Haase HS, Peterson-Kaufman KJ, Lee EF, Clarke OB, Colman PM, Smith BJ, Horne WS, Fairlie WD, Gellman SH. Evaluation of diverse α/β-backbone patterns for functional α-helix mimicry: analogues of the Bim BH3 domain. J Am Chem Soc. 2012 Jan 11;134(1):315-23. PMCID: PMC3364022
3: Lee EF, Sadowsky JD, Smith BJ, Czabotar PE, Peterson-Kaufman KJ, Colman PM, Gellman SH, Fairlie WD. High-resolution structural characterization of a helical alpha/beta-peptide foldamer bound to the anti-apoptotic protein Bcl-xL. Angew Chem Int Ed Engl. 2009;48(24):4318-22. PMCID: PMC2843084
Price, Joshua L.	2003-2006, PhD	Gellmann
1: Price JL, Horne WS, Gellman SH. Structural consequences of beta-amino acid preorganization in a self-assembling alpha/beta-peptide: fundamental studies of foldameric helix bundles. J Am Chem Soc. 2010 Sep 8;132(35):12378-87. PMCID: PMC2981134
2: Price JL, Hadley EB, Steinkruger JD, Gellman SH. Detection and analysis of chimeric tertiary structures by backbone thioester exchange: packing of an alpha helix against an alpha/beta-peptide helix. Angew Chem Int Ed Engl. 2010;49(2):368-71. PMCID: PMC2898193
3: Horne WS, Price JL, Gellman SH. Interplay among side chain sequence, backbone composition, and residue rigidification in polypeptide folding and assembly. Proc Natl Acad Sci U S A. 2008 Jul 8;105(27):9151-6. Erratum in: Proc Natl Acad Sci U S A. 2008 Nov 4;105(44):17205. PMCID: PMC2453709
4: Price JL, Horne WS, Gellman SH. Discrete heterogeneous quaternary structure formed by alpha/beta-peptide foldamers and alpha-peptides. J Am Chem Soc. 2007 May 23;129(20):6376-7. PMID: 17465552
5: Horne WS, Price JL, Keck JL, Gellman SH. Helix bundle quaternary structure from alpha/beta-peptide foldamers. J Am Chem Soc. 2007 Apr 11;129(14):4178-80. PMID: 17362016
Restituyo, Jose	2003-2005, PhD	Rajski
1: Restituyo JA, Comstock LR, Petersen SG, Stringfellow T, Rajski SR. Conversion of aryl azides to O-alkyl imidates via modified Staudinger ligation. Org Lett. 2003 Nov 13;5(23):4357-60. PMID: 14601999
2: Mays JR, Restituyo JA, Katzenberger RJ, Wassarman DA, Rajski SR. Cyclic disulfides as functional mimics of the histone deacetylase inhibitor FK-228. Tetrahedron Lett. 2007 Jun 25;48(26):4579-4583. PMCID: PMC2084391
Rose, Chris	2013-2014, PhD	Coon
1:Rose CM, Merrill AE, Bailey DJ, Hebert AS, Westphall MS, Coon JJ. Lysine and Leucine Amino Acid Counting Enables Peptide Identifications from MS1. Analytical Chemistry, 2013, in press.
2: Ledvina AR, Rose CM, McAlister GC, Syka JE, Westphall MS, Griep-Raming J, Schwartz JC, Coon JJ. Activated Ion ETD Performed in a Modified Collision Cell on a Hybrid QLT-Oribtrap Mass Spectrometer. J Am Soc Mass Spectrom. 2013 May 16. PMCID: PMC3776012
3: Rose CM, Merrill AE, Bailey DJ, Hebert AS, Westphall MS, Coon JJ. Neutron encoded labeling for peptide identification. Anal Chem. 2013 May 21;85(10):5129-37. PMID: 23638792. NIHMSID: NIHMS524209.
4: Rose CM, Russell JD, Ledvina AR, McAlister GC, Westphall MS, Griep-Raming J, Schwartz JC, Coon JJ, Syka JE. Multipurpose dissociation cell for enhanced ETD of intact protein species. J Am Soc Mass Spectrom. 2013 Jun;24(6):816-27. PMCID: PMC3667591.
5: Volkening JD, Bailey DJ, Rose CM, Grimsrud PA, Howes-Podoll M, Venkateshwaran M, Westphall MS, Ané JM, Coon JJ, Sussman MR. A proteogenomic survey of the Medicago truncatula genome. Mol Cell Proteomics. 2012 Oct;11(10):933-44. PMCID: PMC3494139.
6: Rose CM, Venkateshwaran M, Grimsrud PA, Westphall MS, Sussman MR, Coon JJ, Ané JM. Medicago PhosphoProtein Database: a repository for Medicago truncatula phosphoprotein data. Front Plant Sci. 2012;3:122. PMCID: PMC3371616.
7: Rose CM, Venkateshwaran M, Volkening JD, Grimsrud PA, Maeda J, Bailey DJ, Park K, Howes-Podoll M, den Os D, Yeun LH, Westphall MS, Sussman MR, Ané JM, Coon JJ. Rapid phosphoproteomic and transcriptomic changes in the rhizobia-legume symbiosis. Mol Cell Proteomics. 2012 Sep;11(9):724-44. PMCID: PMC3434772.
8: Bailey DJ, Rose CM, McAlister GC, Brumbaugh J, Yu P, Wenger CD, Westphall MS, Thomson JA, Coon JJ. Instant spectral assignment for advanced decision tree-driven mass spectrometry. Proc Natl Acad Sci U S A. 2012 May 29;109(22):8411-6 PMCID: PMC3365209.
9: Brumbaugh J, Rose CM, Phanstiel DH, Thomson JA, Coon JJ. Proteomics and pluripotency. Crit Rev Biochem Mol Biol. 2011 Dec;46(6):493-506. PMCID: PMC3223296.
10: Xia Q, Lee MV, Rose CM, Marsh AJ, Hubler SL, Wenger CD, Coon JJ. Characterization and diagnostic value of amino acid side chain neutral losses following electron-transfer dissociation. J Am Soc Mass Spectrom. 2011 Feb;22(2):255-64. PMCID: PMC3074364.
11: Richards AL, Vincent CE, Guthals A, Rose CM, Westphall MS, Bandeira N, Coon JJ. Neutron-encoded signatures enable automated product ion annotation from tandem mass spectra. Mol Cell Proteomics. 2013 Sep 16. PMID: 24043425
Ryland, Brad	2009-2012, PhD	Stahl
1: Hoover JM, Ryland BL, Stahl SS. Mechanism of copper(I)/TEMPO-catalyzed aerobic alcohol oxidation. J Am Chem Soc. 2013 Feb 13;135(6):2357-67. PMID: 23317450. NIHMSID: NIHMS524202.
2: King AE, Ryland BL, Brunold TC, Stahl SS. Kinetic and Spectroscopic Studies of Aerobic Copper(II)-Catalyzed Methoxylation of Arylboronic Esters and Insights into Aryl Transmetalation to Copper(II). Organometallics. 2012 Nov 26;31(22):7948-7957 PMCID: PMC3509420.
Schuster, Michael C.	1999-1999, MD/PhD	Kiessling
1: Schuster MC, Mann DA, Buchholz TJ, Johnson KM, Thomas WD, Kiessling LL. Parallel synthesis of glycomimetic libraries: targeting a C-type lectin. Org Lett. 2003 May 1;5(9):1407-10 PMID: 12713285
2: Thompson JE, Kutateladze TG, Schuster MC, Venegas FD, Messmore JM, Raines RT. Limits to Catalysis by Ribonuclease A. Bioorg Chem. 1995 Dec; 23(4):471-481. PMID: 21799547 [PubMed] Free PMC Article
3: Burke SD, Zhao Q, Schuster MC, Kiessling LL. Synergistic formation of soluble lectin clusters by a templated multivalent saccharide ligand. J Am Chem Soc. 2000 May 10; 122(18):4518-4519
4: Schuster MC, Mortell KH, Hegeman AD, Kiessling LL. Neoglycopolymers produced by aqueous ring-opening metathesis polymerization: Decreasing saccharide density increases activitiy. J Mol Cata A: Chem. 1997 Feb 24;116(1-2):209-216
Schwartzman, Julia A.	2013-2014, PhD	Ruby
1: Kremer N, Philipp EE, Carpentier MC, Brennan CA, Kraemer L, Altura MA, Augustin R, Häsler R, Heath-Heckman EA, Peyer SM, Schwartzman J, Rader BA, Ruby EG, Rosenstiel P, McFall-Ngai MJ. Initial Symbiont Contact Orchestrates Host-Organ-wide Transcriptional Changes that Prime Tissue Colonization. Cell Host Microbe. 2013 Aug 14;14(2):183-94. PMID: 23954157. NIHMSID: NIHMS510875.
2: Miyashiro T, Klein W, Oehlert D, Cao X, Schwartzman J, Ruby EG. The N-acetyl-D-glucosamine repressor NagC of Vibrio fischeri facilitates colonization of Euprymna scolopes. Mol Microbiol. 2011 Nov;82(4):894-903 PMCID: PMC3212624.
Sheridan, Rachael (Carpenter)	2007-2010, PhD	Kiessling
1: Mangold SL, Carpenter RT, Kiessling LL. Synthesis of fluorogenic polymers for visualizing cellular internalization. Org Lett. 2008 Jul 17;10(14):2997-3000. PMCID: PMC2771217
2: Klim JR, Fowler AJ, Courtney AH, Wrighton PJ, Sheridan RT, Wong ML, Kiessling LL. Small-molecule-modified surfaces engage cells through the αvβ3 integrin. ACS Chem Biol. 2012 Mar 16;7(3):518-25. PMCID: PMC3306508
Singer, Steven W.	1998-2001, PhD	Casey
1: Casey CP, Johnson JB, Singer SW, Cui Q. Hydrogen elimination from a hydroxycyclopentadienyl ruthenium(II) hydride: study of hydrogen activation in a ligand-metal bifunctional hydrogenation catalyst. J Am Chem Soc. 2005 Mar 9;127(9):3100-9. Erratum in: J Am Chem Soc. 2008 Jan 23;130(3):1110. PMID: 15740149
2: Casey CP, Singer SW, Powell DR, Hayashi RK, Kavana M. Hydrogen transfer to carbonyls and imines from a hydroxycyclopentadienyl ruthenium hydride: evidence for concerted hydride and proton transfer. J Am Chem Soc. 2001 Feb 14;123(6):1090-100. PMID: 11456662
3: Casey CP, Johnson JB, Singer SW, Cui Q Hydrogen elimination from a hydroxycyclopentadienyl ruthenium(II) hydride: Study of hydrogen activation in a ligand-metal bifunctional hydrogenation catalyst. J Am Chem Soc. 2005;127(9): 3100-3109. Erratum in J Am Chem Soc. 2008 Jan 23;130(3):1110. PMID: 15740149
4: Casey CP, Vos TE, Singer SW, Guzei IA Protonated aminocyclopentadienyl ruthenium hydride reduction of benzaldehyde and the conversion of the resulting ruthenium triflate to a ruthenium hydride with H-2 and base. Organometallics. 2002;21(23):5038-5046.
5: Casey CP, Singer SW, Powell DR. The role of a hydroxycyclopentadienyl ruthenium dicarbonyl formate in formic acid reductions of carbonyl compounds catalyzed by Shvo’s diruthenium catalyst. Can J Chem. 2001;79(5):1002-1011
6: Casey CP, Johnson JB, Jiao X, Beetner SE, Singer SW. Chain mechanism for exchange of D2 with a ruthenium hydride. Chem Commun (Camb). 2010 Nov 14;46(42):7915-7. PMID: 20856982
Sprague, Christopher L.	1999-2003, PhD	Elfarra
1: Sprague CL, Elfarra AA. Protection of rats against 3-butene-1,2-diol-induced hepatotoxicity and hypoglycemia by N-acetyl-l-cysteine. Toxicol Appl Pharmacol. 2005 Sep 15;207(3):266-74. PMID: 16129119
2: Sprague CL, Elfarra AA. Mercapturic acid urinary metabolites of 3-butene-1,2-diol as in vivo evidence for the formation of hydroxymethylvinyl ketone in mice and rats. Chem Res Toxicol. 2004 Jun;17(6):819-26. PMID: 15206903
3: Sprague CL, Phillips LA, Young KM, Elfarra AA. Species and tissue differences in the toxicity of 3-butene-1,2-diol in male Sprague-Dawley rats and B6C3F1 mice. Toxicol Sci. 2004 Jul;80(1):3-13. PMID: 15129020
4: Sprague CL, Elfarra AA. Detection of carboxylic acids and inhibition of hippuric acid formation in rats treated with 3-butene-1,2-diol, a major metabolite of 1,3-butadiene. Drug Metab Dispos. 2003 Aug;31(8):986-92. Erratum in: Drug Metab Dispos. 2003 Sep 31(9):1198. PMID: 12867486

Thiriot, David S.	1997-1999, PhD	Ruoho
1: Thiriot DS, Ruoho AE. Mutagenesis and derivatization of human vesicle monoamine transporter 2 (VMAT2) cysteines identifies transporter domains involved in tetrabenazine binding and substrate transport. J Biol Chem. 2001 Jul 20;276(29):27304-15. PMID: 11375404
2: Thiriot DS, Sievert MK, Ruoho AE. Identification of human vesicle monoamine transporter (VMAT2) lumenal cysteines that form an intramolecular disulfide bond. Biochemistry. 2002 May 21;41(20):6346-53. PMID: 12009896
3: Wu Z, Thiriot DS, Ruoho AE. Tyr199 in transmembrane domain 5 of the beta2-adrenergic receptor interacts directly with the pharmacophore of a unique fluorenone-based antagonist. Biochem J. 2001 Mar 15;354(Pt 3):485-91. PMCID: PMC1221679
4: Rong Y, Arbabian M, Thiriot DS, Seibold A, Clark RB, Ruoho AE. Probing the salmeterol binding site on the beta 2-adrenergic receptor using a novel photoaffinity ligand, [(125)I]iodoazidosalmeterol. Biochemistry. 1999 Aug 31;38(35):11278-86. PMID: 10471277
5: Sievert MK, Thiriot DS, Edwards RH, Ruoho AE. High-efficiency expression and characterization of the synaptic-vesicle monoamine transporter from baculovirus-infected insect cells. Biochem J. 1998 Mar 1;330 ( Pt 2):959-66. PMCID: PMC1219231
Tseng, Ta-Sheng A.	1996-1999, PhD	Burstyn
Deck KM, Tseng TA, Burstyn JN. Triisopropyltriazacyclononane copper(II): an efficient phosphodiester hydrolysis catalyst and DNA cleavage agent. Inorg Chem. 2002 Feb 25;41(4):669-77. PMID: 11849065
Voight, Eric A.	2000-2003, PhD	Burke
1: Marvin CC, Voight EA, Burke SD. Synthesis of (+)-didemniserinolipid B via ketalization/ring-closing metathesis. Org Lett. 2007 Dec 20;9(26):5357-9. PMCID: PMC2657677
2: Marvin CC, Voight EA, Burke SD. Synthesis of (+)-didemniserinolipid B via ketalization/ring-closing metathesis. Org Lett. 2007 Dec 20;9(26):5357-9. PMID: 18047361
3: Voight EA, Seradj H, Roethle PA, Burke SD. Synthesis of the bryostatin 1 northern hemisphere (C1-C16) via desymmetrization by ketalization/ring-closing metathesis. Org Lett. 2004 Oct 28;6(22):4045-8. PMID: 15496095
4: Voight EA, Roethle PA, Burke SD. Concise formal synthesis of the bryostatin southern hemisphere (C17-C27). J Org Chem. 2004 Jun 25;69(13):4534-7. PMID: 15202915
5: Voight EA, Rein C, Burke SD. Synthesis of sialic acids via desymmetrization by ring-closing metathesis. J Org Chem. 2002 Nov 29;67(24):8489-99. PMID: 12444630
6: Burke SD, Voight EA. Formal synthesis of (+)-3-deoxy-D-glycero-D-galacto-2-nonulosonic acid (KDN) via desymmetrization by ring-closing metathesis. Org Lett. 2001 Jan 25;3(2):237-40. PMID: 11430043
7: Wysocki LM, Dodge MW, Voight EA, Burke SD. Stereochemically general approach to adjacent bis(tetrahydrofuran) cores of annonaceous acetogenins. Org Lett. 2006 Nov 23;8(24):5637-40. PMID: 17107091
Watkins, Rex	2007-2010, PhD	Raines
1: Watkins RW, Arnold U, Raines RT. Ribonuclease S redux. Chem Commun (Camb). 2011 Jan 21;47(3):973-5. PMCID: PMC3077719
2: Watkins RW, Lavis LD, Kung VM, Los GV, Raines RT. Fluorogenic affinity label for the facile, rapid imaging of proteins in live cells. Org Biomol Chem. 2009 Oct 7;7(19):3969-75. Erratum in: Org Biomol Chem. 2009 Dec 21;7(24):5276. PMCID: PMC2800956
Werner, Elizabeth A.	1996-1999, PhD	DeLuca
1: Werner EA, DeLuca HF. Retinoic acid is detected at relatively high levels in the CNS of adult rats. Am J Physiol Endocrinol Metab. 2002 Mar;282(3):E672-8. PMID: 11832372
2: Werner EA, DeLuca HF. Metabolism of a physiological amount of all-trans-retinol in the vitamin A-deficient rat. Arch Biochem Biophys. 2001 Sep 15;393(2):262-70. PMID: 11556813
Wesener, Darryl	2010-2011	Kiessling
1: Wesener DA, May JF, Huffman EM, Kiessling LL. UDP-Galactopyranose Mutase in Nematodes. Biochemistry. 2013 Jun 25;52(25):4391-8. PMCID: PMC3779688
Woycechowsky, Kenneth J.	1996-1998, PhD	Raines
1: Woycechowsky KJ, Hook BA, Raines RT. Catalysis of protein folding by an immobilized small-molecule dithiol. Biotechnol Prog. 2003 Jul-Aug;19(4):1307-14. PMID: 12892495
2: Woycechowsky KJ, Raines RT. The CXC motif: a functional mimic of protein disulfide isomerase. Biochemistry. 2003 May 13;42(18):5387-94. PMCID: PMC2819094
3: Sweeney RY, Kelemen BR, Woycechowsky KJ, Raines RT. A highly active immobilized ribonuclease. Anal Biochem. 2000 Nov 15;286(2):312-4. PMID: 11067760
4: Woycechowsky KJ, Raines RT. Native disulfide bond formation in proteins. Curr Opin Chem Biol. 2000 Oct;4(5):533-9. Review. PMCID: PMC2814060
5: Klink TA, Woycechowsky KJ, Taylor KM, Raines RT. Contribution of disulfide bonds to the conformational stability and catalytic activity of ribonuclease A. Eur J Biochem. 2000 Jan;267(2):566-72. PMID: 10632727
6: Woycechowsky KJ, Wittrup KD, Raines RT. A small-molecule catalyst of protein folding in vitro and in vivo. Chem Biol. 1999 Dec;6(12):871-9. PMID: 10631515

Name of Trainee

Years supported by CBI, Degree

Mentor(s)

Appella, Daniel

1994-1996, PhD

Gellman

Beauchene Ellis, Nicole

2009-2012, PhD

Coon, Kiley

Binder, Joseph

2005-2009, PhD

Raines

Blum, Travis

2012-2014, PhD

Yoon

Breitbach, Anthony

2009-2012, PhD

Blackwell

Buck, Maren

2006-2008, PhD

Lynn

Carr, Heather S.

1996-1999, PhD

Burstyn

Chan, Yolande

2002-2005, PhD

Thomas

Cherney, Melisa M.

2001-2004, PhD

Burstyn

Ciolli, Christopher J.

1999-2003, PhD

Belshaw

Elder, Amy M.

1997-1999, PhD

Rich

English, Emily (Payne)

2005-2006, PhD

Gellman

Fix, Shannon R.

1999-2001, MS

Stahl

Fishman, Josh

2012-2014, PhD

Kiessling

Gelman, Michael A.

1998-2002, MD/PhD

Gellman

George, Nicholas P.

2005-2008, PhD

Keck

Gorres, Kelly L.

2003-2006, PhD

Raines

Harper, Laura A.

1995-1996, PhD

Vedejs

Hinderaker, Matthew P.

2000-2001, MS

Raines

Howard, Alex L.

2013-2014, MS

Beebe

Jenkins, Cara L.

1998-2001, PhD

Raines

Johnson, Heather D.

2002-2005, PhD

Thorson

Johnson, Lisa

2008-2011, PhD

Gellman

Johnson, Olivia

2007-2010, PhD

Brunold

Kolonko, Erin (McElroy)

2001-2005, PhD

Kiessling

Kremer, John J.

1997-1999, PhD